| structure name | CRYSTAL STRUCTURE OF KLEBSIELLA PNEUMONIAE PMRA IN COMPLEX WITH PMRA BOX DNA (DNA-binding transcriptional regulator BasR) |
| reference | Hsiao et al. 'Nat 6 8838 2015 |
| source | Klebsiella pneumoniae |
| experiment | X-ray (resolution=3.20, R-factor=0.183) |
| structural superfamily | CheY-like;C-terminal effector domain of the bipartite response regulators; |
| sequence family | Response regulator receiver domain; Transcriptional regulatory protein, C te; |
| multimeric complexes | 4s04_EF 4s05_AB |
| redundant complexes |  4s05_A
|
| links to other resources | NAKB  PDIdb DNAproDB |
| protein sequence | |
| interface signature | NVR |
Estimated binding specificities ?
| contact |  |
A | 0 96 75 0 7 73 73 0 C | 0 0 7 0 73 7 7 0 G | 0 0 7 96 9 9 7 96 T | 96 0 7 0 7 7 9 0scan! |
Related DNA sequences reported in the literature ?
| site | source | matches (E-value) |
|---|---|---|
| term: PMRA | ||
| CTTAAT | PubMed | 4s04_B(6.35e-03), 4s05_AB(3.71e-04), 4s05_A(2.61e-07) |
| CCTAAG | PubMed | 4s04_B(6.35e-03) |
Dendrogram of similar interfaces ?
matrix format------------------RGDTVTSTRG----WT-- L +-------------6lxn_A +---------------1 ----------------------------YGRG---- +-2 +-------------4wcg_A ! ! --------------QA------------------NG +-3 +-----------------------------7k63_U ! ! ----------------RC------------------ +-4 +-----------------------------6l9z_S ! ! FTDTITVTAT--IT---------------------- L --5 +-----------------------------3zh2_C ! ----------ET------------------------ +-----------------------------7aud_E |
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updated Fri Jun 16 02:18:49 2023