1a74_AB : 3D-footprint complex

structure name	I-PPOL HOMING ENDONUCLEASE/DNA COMPLEX
reference	Monnat Junior et al.
source	Physarum polycephalum
experiment	X-ray (resolution=2.20, R-factor=?)
structural superfamily	His-Me finger endonucleases;
reference complex	8vms_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 1a74_A interface=54,56,60,62,64,66,71,73,115,119, altnaqilavidsweetvgqfpvithhvplggglqgtlhcyeiplaapygvgfAkNgptRwQyKrTinqvVhRwgshtvpfllepdningktctashlchntrchnplhlcwesLddnKgrnwcpgpnggcvhavvclrqgplygpgatvagpqqrgshfvv > 1a74_B interface=54,56,60,62,64,66,73,115,119, altnaqilavidsweetvgqfpvithhvplggglqgtlhcyeiplaapygvgfAkNgptRwQyKrTinqvvhRwgshtvpfllepdningktctashlchntrchnplhlcwesLddnKgrnwcpgpnggcvhavvclrqgplygpgatvagpqqrgshfvv
interface signature	ANRQKTVRLK/ANRQKTRLK

Estimated binding specificities ?

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# IC=22.765 IC/col=1.138 n_of_columns=20

specificity:

A |   0   4  72   0   0   0   0   0   4   4  84  96   0  96   0  96   0   8   4  96
C |   0   4   8  96   0  96   0  96   4   4   4   0   0   0   0   0   0   4  84   0
G |   0  84   8   0   0   0   0   0   4   4   4   0  96   0  96   0  96   8   4   0
T |  96   4   8   0  96   0  96   0  84  84   4   0   0   0   0   0   0  76   4   0

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updated Mon Sep 9 11:49:43 2024