1b3t_AB : 3D-footprint complex

structure name	EBNA-1 NUCLEAR PROTEIN/DNA COMPLEX
reference	Bochkareva et al.
source	Human herpesvirus 4
experiment	X-ray (resolution=2.20, R-factor=?)
structural superfamily	Viral DNA-binding domain;
reference complex	7u1t_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 1b3t_A interface=1,4,5,9,15,17,18,54,55,58,59,62, KggWFgkhRgqggsNpKFeniaeglrallarshverttdegtwvagvfvyggsKTslYNlrRgtalaipqcrltplsrlpfgmapgpgpqpgplresivcyfmvflqthifaevlkdaikdlvmtkpaptcnirvtvcsfddgvdlp > 1b3t_B interface=1,4,5,9,17,18,54,55,58,59,62, KggWFgkhRgqggsnpKFeniaeglrallarshverttdegtwvagvfvyggsKTslYNlrRgtalaipqcrltplsrlpfgmapgpgpqpgplresivcyfmvflqthifaevlkdaikdlvmtkpaptcnirvtvcsfddgvdlp
interface signature	KWFRNKFKTYNR/KWFRKFKTYNR

Estimated binding specificities ?

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# IC=17.104 IC/col=0.950 n_of_columns=18

specificity:

A |   1   0   0  96  94   1   4  24   4  71  24   1   9   1   0   0   0   0
C |  10   0   0   0   1   1  78  24  11   1  24   1  59   1   0  96  96  96
G |  84  96  96   0   1  90   1  24   1  15  24  90  15   4   0   0   0   0
T |   1   0   0   0   0   4  13  24  80   9  24   4  13  90  96   0   0   0

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updated Wed Jun 24 08:50:11 2026