1c7u_AB : 3D-footprint complex

structure name	COMPLEX OF THE DNA BINDING CORE DOMAIN OF THE TRANSCRIPTION FACTOR MEF2A WITH A 20MER OLIGONUCLEOTIDE
source	HOMO SAPIENS
experiment	NMR
structural superfamily	SRF-like;
reference complex	7xuz_H
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 1c7u_A interface=2,14,18,22, gRkkiqitrimdeRnrqVtftKrkfglmkkayelsvladaeialiifnssnklfqyastdmdkvllkyteynep > 1c7u_B interface=2,14,18,22, gRkkiqitrimdeRnrqVtftKrkfglmkkayelsvladaeialiifnssnklfqyastdmdkvllkyteynep
interface signature	RRVK/RRVK

Estimated binding specificities ?

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# IC=10.269 IC/col=0.642 n_of_columns=16

specificity:

A |   0   8  24  16   0  96  24  24  24  24   0  96  16  24   0   0
C |  96   8  24  56   0   0  24  24  24  24   0   0  16  24  96   0
G |   0  72  24  16   0   0  24  24  24  24   0   0  48  24   0  96
T |   0   8  24   8  96   0  24  24  24  24  96   0  16  24   0   0

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updated Fri Dec 13 08:50:10 2024