1co0_AB : 3D-footprint complex

structure name	NMR STUDY OF TRP REPRESSOR-MTR OPERATOR DNA COMPLEX
source	ESCHERICHIA COLI
experiment	NMR
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 1co0_A interface=66,69,74,76,77,78,79,80,81, qspysaamaeqrhqewlrfvdllknayqndlhlpllnlmltpderealgtrvriveellrgemsqRelKnelgAgIATITRgsnslkaapvelrqwleevllksd > 1co0_B interface=76,77,80,81, qspysaamaeqrhqewlrfvdllknayqndlhlpllnlmltpderealgtrvriveellrgemsqrelknelgagIAtiTRgsnslkaapvelrqwleevllksd
interface signature	RKAIATITR/IATR

Estimated binding specificities ?

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# IC=11.096 IC/col=0.740 n_of_columns=15

specificity:

A |   0   0   0  24  24  24  24  24  13  13   0   0   0  96   0
C |  96   0  96  24  24  24  24  24  54  16   0   0   0   0  96
G |   0   0   0  24  24  24  24  24  16  13  96  96   0   0   0
T |   0  96   0  24  24  24  24  24  13  54   0   0  96   0   0

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updated Fri Dec 13 08:52:44 2024