interface graph thumbnail
legend  pdf

structure nameCRYSTAL STRUCTURE OF A TERNARY COMPLEX CONTAINING AN OCA-B PEPTIDE, THE OCT-1 POU DOMAIN, AND AN OCTAMER ELEMENT
referenceChasman et al.
sourceHOMO SAPIENS
experimentX-ray (resolution=3.20, R-factor=?)
structural superfamilylambda repressor-like DNA-binding domains;Homeodomain-like;
reference complex1cqt_I 1o4x_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureSQTSRLNRRVCNQ/YVV

Estimated binding specificities ?

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# IC=9.412 IC/col=0.941 n_of_columns=10 specificity:   
A |  10  96   0   0  21   0  24  96   0  53
C |  10   0   0   0   0   0  24   0   0  12
G |  10   0   0   0   1  96  24   0   0  10
T |  66   0  96  96  74   0  24   0  96  21
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updated Tue Jul 29 14:28:49 2025