1cz0_AB : 3D-footprint complex

structure name	INTRON ENCODED HOMING ENDONUCLEASE I-PPOI/DNA COMPLEX LACKING CATALYTIC METAL ION
reference	Stoddard et al. Nat.Struct.Biol. 6 1096 1999
source	Physarum polycephalum
experiment	X-ray (resolution=2.10, R-factor=?)
structural superfamily	His-Me finger endonucleases;
reference complex	8vms_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 1cz0_A interface=54,56,60,62,64,66,71,73,115,119, altnaqilavidsweetvgqfpvithhvplggglqgtlhcyeiplaapygvgfAkNgptRwQyKrTinqvVhRwgshtvpfllepdningktctashlchntrchnplhlcwesLddnKgrnwcpgpnggcvhavvclrqgplygpgatvagpqqrgshfvv > 1cz0_B interface=54,56,60,62,64,66,73,115,119, altnaqilavidsweetvgqfpvithhvplggglqgtlhcyeiplaapygvgfAkNgptRwQyKrTinqvvhRwgshtvpfllepdningktctashlchntrchnplhlcwesLddnKgrnwcpgpnggcvhavvclrqgplygpgatvagpqqrgshfvv
interface signature	ANRQKTVRLK/ANRQKTRLK

Estimated binding specificities ?

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# IC=20.014 IC/col=1.053 n_of_columns=19

specificity:

A |  10   0  64   0   0   7   1   3   3   0  94  86   1  86   0  96   0   6   0
C |   3   0   4  96   0  89  27  88   1   0   0   1   4   4   1   0   0  64  96
G |   5  96  25   0   0   0   0   5   6   0   1   3  86   3  94   0  96   3   0
T |  78   0   3   0  96   0  68   0  86  96   1   6   5   3   1   0   0  23   0

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updated Fri Dec 13 08:53:17 2024