1cz0_AB : 3D-footprint complex

structure name	INTRON ENCODED HOMING ENDONUCLEASE I-PPOI/DNA COMPLEX LACKING CATALYTIC METAL ION
reference	Stoddard et al. Nat.Struct.Biol. 6 1096 1999
source	Physarum polycephalum
experiment	X-ray (resolution=2.10, R-factor=?)
structural superfamily	His-Me finger endonucleases;
reference complex	8vms_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 1cz0_A interface=54,56,60,62,64,66,71,73,115,119, altnaqilavidsweetvgqfpvithhvplggglqgtlhcyeiplaapygvgfAkNgptRwQyKrTinqvVhRwgshtvpfllepdningktctashlchntrchnplhlcwesLddnKgrnwcpgpnggcvhavvclrqgplygpgatvagpqqrgshfvv > 1cz0_B interface=54,56,60,62,64,66,73,115,119, altnaqilavidsweetvgqfpvithhvplggglqgtlhcyeiplaapygvgfAkNgptRwQyKrTinqvvhRwgshtvpfllepdningktctashlchntrchnplhlcwesLddnKgrnwcpgpnggcvhavvclrqgplygpgatvagpqqrgshfvv
interface signature	ANRQKTVRLK/ANRQKTRLK

Estimated binding specificities ?

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# IC=19.043 IC/col=1.058 n_of_columns=18

specificity:

A |   0  23   0   0   1   0   7   7   0  96  78   0  52   0  96   0   1   0
C |   0   5  96   0  95   0  76   3   0   0   3   7   0   0   0   0  46  96
G |  96  63   0   0   0   0   8   3   0   0   6  86  44  91   0  96   9   0
T |   0   5   0  96   0  96   5  83  96   0   9   3   0   5   0   0  40   0

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updated Sun Jan 4 20:54:54 2026