1d66_AB : 3D-footprint complex

structure name	DNA RECOGNITION BY GAL4: STRUCTURE OF A PROTEIN/DNA COMPLEX
reference	Marmorstein et al. Nature 356 408 1992
source	Saccharomyces cerevisiae
experiment	X-ray (resolution=2.70, R-factor=?)
structural superfamily	Zn2/Cys6 DNA-binding domain;
reference complex	1d66_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 1d66_A interface=8,11,12, eqacdicRlkKLkcskekpkcakclknnwecryspktkrspltrahltevesrlerl > 1d66_B interface=11, eqacdicrlkKlkcskekpkcakclknnwecryspktkrspltrahltevesrlerl
interface signature	RKL/K

Estimated binding specificities ?

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# IC=4.971 IC/col=0.292 n_of_columns=17

specificity:

A |   0   7   3  24  24  24  24  24  24  24  24  24  24  16   4   6   9
C |  96   7   3  24  24  24  24  24  24  24  24  24  24  16  84  78   9
G |   0  75  87  24  24  24  24  24  24  24  24  24  24  19   4   6  67
T |   0   7   3  24  24  24  24  24  24  24  24  24  24  45   4   6  11

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updated Mon Sep 9 12:03:55 2024