1d66_AB : 3D-footprint complex

structure name	DNA RECOGNITION BY GAL4: STRUCTURE OF A PROTEIN/DNA COMPLEX
reference	Marmorstein et al. Nature 356 408 1992
source	Saccharomyces cerevisiae
experiment	X-ray (resolution=2.70, R-factor=?)
structural superfamily	Zn2/Cys6 DNA-binding domain;
reference complex	1d66_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 1d66_A interface=8,11,12, eqacdicRlkKLkcskekpkcakclknnwecryspktkrspltrahltevesrlerl > 1d66_B interface=11, eqacdicrlkKlkcskekpkcakclknnwecryspktkrspltrahltevesrlerl
interface signature	RKL/K

Estimated binding specificities ?

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# IC=4.832 IC/col=0.284 n_of_columns=17

specificity:

A |   9   6   4  48  24  24  24  24  24  24  24  24  24  24   3   7   0
C |  67   6   7  16  24  24  24  24  24  24  24  24  24  24  85  74   0
G |   9  78  81  16  24  24  24  24  24  24  24  24  24  24   3   8  96
T |  11   6   4  16  24  24  24  24  24  24  24  24  24  24   5   7   0

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updated Tue Jul 29 14:30:52 2025