1g4d_A : 3D-footprint complex

structure name	NMR STRUCTURE OF THE MU BACTERIOPHAGE REPRESSOR DNA-BINDING DOMAIN/DNA COMPLEX (REPRESSOR PROTEIN C)
source	ENTEROBACTERIA PHAGE MU
experiment	NMR
structural superfamily	Putative DNA-binding domain;
sequence family	Mu DNAbinding domain;
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 1g4d_A interface=19,21,24,25,41,44, ksiwcspqeimaadgmpgSvAgvHYranvqgwtkrkkegvKggKaveydvmsmptkereqviahlglst
interface signature	SAHYKK

Estimated binding specificities ?

contact

# IC=5.782 IC/col=0.578 n_of_columns=10

specificity:

A |   5  80   5   5   5  24  24  81  24   0
C |   6   6  80   6   6  24  24   5  24   0
G |   5   5   6   5  80  24  24   5  24  96
T |  80   5   5  80   5  24  24   5  24   0

scan!

home
updated Fri Sep 13 15:37:15 2024