1hf0_AB : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF THE DNA-BINDING DOMAIN OF OCT-1 BOUND TO DNA AS A DIMER
reference	Scholer et al. Mol.Cell 8 569 2001
source	HOMO SAPIENS
experiment	X-ray (resolution=2.70, R-factor=?)
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 1hf0_A interface=22,38,39,40,43,44,71,74,115,116,119,120,123, leeleqfaktfkqrriklgftQgdvglamgklygndfSQTtiSRfealnlsfknmsklkpllekwlndaeRkkRtsietnirvaleksflenqkptseeitmiadqlnmekeviRVwfSNrrQkekri > 1hf0_B interface=22,38,39,40,43,44,71,74,116,119,120,123, leeleqfaktfkqrriklgftQgdvglamgklygndfSQTtiSRfealnlsfknmsklkpllekwlndaeRkkRtsietnirvaleksflenqkptseeitmiadqlnmekevirVwfSNrrQkekri
interface signature	QSQTSRRRRVSNQ/QSQTSRRRVSNQ

Estimated binding specificities ?

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# IC=18.657 IC/col=1.097 n_of_columns=17

specificity:

A |   0  89   0   0   0   0   3   9   0   0   3   0  96  83  96   7   3
C |  85   0   0   0   0   0  81  81   0   0  24  96   0   7   0  67   0
G |   1   7   0   0   0  96   3   3   0   0   3   0   0   3   0   7  93
T |  10   0  96  96  96   0   9   3  96  96  66   0   0   3   0  15   0

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updated Fri Dec 13 09:18:00 2024