1hwt_GH : 3D-footprint complex

structure name	STRUCTURE OF A HAP1/DNA COMPLEX REVEALS DRAMATICALLY ASYMMETRIC DNA BINDING BY A HOMODIMERIC PROTEIN
reference	Marmorstein et al. Nat.Struct.Biol. 6 64 1999
source	Saccharomyces cerevisiae
experiment	X-ray (resolution=2.50, R-factor=?)
structural superfamily	Zn2/Cys6 DNA-binding domain;
reference complex	1hwt_C
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 1hwt_G interface=12,13,14, riplscticrkRKVkcdklrphcqqctktgvahlchymeqtwaeeaekellkdnelkklrervkslektl > 1hwt_H interface=2,4,16, kRnRiplscticrkrKvkcdklrphcqqctktgvahlchymeqtwaeeaekellkdnelkklrervkslektl
interface signature	RKV/RRK

Estimated binding specificities ?

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# IC=11.409 IC/col=0.951 n_of_columns=12

specificity:

A |  13   0   6  96   0  96  54  16  24   0   0   0
C |   0  96   6   0   0   0  16  13  24   0  96   0
G |  82   0  75   0   0   0  13   6  24  96   0  96
T |   1   0   9   0  96   0  13  61  24   0   0   0

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updated Fri Dec 15 09:10:48 2023