| structure name | SOLUTION STRUCTURE OF THE DNA COMPLEX OF HUMAN TRF1 (TELOMERIC REPEAT BINDING FACTOR 1) |
| source | HOMO SAPIENS |
| experiment | NMR |
| structural superfamily | Homeodomain-like; |
| sequence family | Myblike DNAbinding domain; |
| links to other resources | NAKB  PDIdb DNAproDB |
| protein sequence | |
| interface signature | RSVMKDRT |
Estimated binding specificities ?
| contact |  |
A | 24 84 78 0 0 0 C | 18 0 6 72 96 96 G | 12 6 6 0 0 0 T | 42 6 6 24 0 0scan! |
Dendrogram of similar interfaces ?
matrix formatRA------------------ITQTNAMG-- L +5zjt_E +--------------2 RT------------------NT--NAITRG L +------9 +5zjt_B ! ! RA----------------KGSAQA------ L ! +--------------6j5b_C ! RT----------------KTIAQCNA---- L ! +1ig7_A ! +-5 RT------------------ITQCNAACRG L ! ! +6a8r_A +-11 +------7 --------------------IA--NA---- ! ! ! ! +4qtr_D ! ! ! +--3 RT------------------NT--NAIARG L ! ! +------8 +1b72_B ! ! ! ! RT------------------NT--NA--RG L ! ! ! ! +1b8i_B ! ! ! +--------4 --------------------NCITNARGRG L +-12 +---10 +6fqq_E ! ! ! RT------------------IAKGNA---- L ! ! ! +2hdd_A ! ! ! +-1 --------------RTQT--ITQANAVTKT L ! ! +--------------6 +2ld5_A +-13 ! ! RT----------STVC--KGDCRG------ L ! ! ! +-1w0t_A ! ! ! ------------YTVC--KGDCKC------ L +-14 ! +-----------------------2qhb_A ! ! ! RA----YA------------IAQCNAYCKG L ! ! +-------------------------5flv_I +-15 ! --------------KG--RTEC-------- L ! ! +---------------------------1h89_C +-16 ! ----------YC------------------ L ! ! +-----------------------------2yvh_A -17 ! --------LT--RTSGTGQTRG-------- L ! +-----------------------------2xro_E ! --RGRT------------------------ L +-----------------------------6lui_A |
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updated Mon Dec 18 05:12:33 2023