interface graph thumbnail
legend  pdf

structure nameCATABOLITE GENE ACTIVATOR PROTEIN (CAP)/DNA COMPLEX + ADENOSINE-3',5'- CYCLIC-MONOPHOSPHATE
(CATABOLITE GENE ACTIVATOR PROTEIN CAP)
referenceGunasekera et al. J.Mol.Biol. 260 395 1996
sourceEscherichia coli
experimentX-ray (resolution=2.50, R-factor=0.199)
structural superfamilycAMP-binding domain-like;"Winged helix" DNA-binding domain;
sequence familyCyclic nucleotidebinding domain; Bacterial regulatory proteins, crp famil;
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureQSRER

Estimated binding specificities ?

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# IC=4.007 IC/col=0.801 n_of_columns=5 specificity:   
A |   9   0  67   0  67
C |   9  96   9  96   9
G |   9   0  11   0   9
T |  69   0   9   0  11
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updated Mon Dec 16 17:57:24 2024