1l1m_AB : 3D-footprint complex

structure name	SOLUTION STRUCTURE OF A DIMER OF LAC REPRESSOR DNA-BINDING DOMAIN COMPLEXED TO ITS NATURAL OPERATOR O1
source	ESCHERICHIA COLI
experiment	NMR
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 1l1m_A interface=6,7,16,17,18,21,22,29,53,56,57, mkpvtLYdvaeyagvSYQtvSRvvnqasHvsaktrekveaamaelnyipnrcAqqLAgkqsl > 1l1m_B interface=7,16,17,18,21,22,29,53,56,57, mkpvtlYdvaeyagvSYQtvSRvvnqasHvsaktrekveaamaelnyipnrcAqqLAgkqsl
interface signature	LYSYQSRHALA/YSYQSRHALA

Estimated binding specificities ?

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# IC=18.337 IC/col=1.079 n_of_columns=17

specificity:

A |   3   9   6   0   0  96   0   0   0   5  96   0  96  96  13  76  86
C |   3   6   6   0   0   0   0  96   0   0   0   0   0   0  65   8   3
G |   4   6  78   0  96   0  96   0  96  82   0   0   0   0   9   6   4
T |  86  75   6  96   0   0   0   0   0   9   0  96   0   0   9   6   3

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updated Fri Dec 13 09:40:29 2024