1lb2_ABE : 3D-footprint complex

structure name	STRUCTURE OF THE E. COLI ALPHA C-TERMINAL DOMAIN OF RNA POLYMERASE IN COMPLEX WITH CAP AND DNA
reference	Parkinson et al. Science 297 1562 2002
source	ESCHERICHIA COLI
experiment	X-ray (resolution=3.10, R-factor=?)
structural superfamily	C-terminal domain of RNA polymerase alpha subunit;
reference complex	3n4m_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 1lb2_A interface=162,171,172,173,174,177, ptlewflshchihkypskstlihqgekaetlyyivkgsvavlikdeegkemilsylnqgdfigelglfeegqersawvraktacevaeisykkfrqliqvnpdilmrlsaqmarrlqvtsekvgnlafldvtgriaqtllnlakqpdamthpdgmqikitrQeigqivgcSRETvgRilkmledqnlisahgktivvygtr > 1lb2_B interface=16, dpillrpvddleltvRsanclkaeaihyigdlvqrtevellktpnlgkkslteikdvlasrglslgmrlenw > 1lb2_E interface=16, dpillrpvddleltvRsanclkaeaihyigdlvqrtevellktpnlgkkslteikdvlasrglslg
interface signature	QSRETR/R/R

Estimated binding specificities ?

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# IC=6.490 IC/col=0.382 n_of_columns=17

specificity:

A |   0  19  24  24  24  24  24  24  24  24  24  24  20   0   9   0  96
C |   0   0  24  24  24  24  24  24  24  24  24  24   9   0   9   0   0
G |   0  10  24  24  24  24  24  24  24  24  24  24  19  96  11  96   0
T |  96  67  24  24  24  24  24  24  24  24  24  24  48   0  67   0   0

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updated Tue Jul 29 15:16:46 2025