1lli_AB : 3D-footprint complex

structure name	THE CRYSTAL STRUCTURE OF A MUTANT PROTEIN WITH ALTERED BUT IMPROVED HYDROPHOBIC CORE PACKING
reference	Richards et al.
source	Enterobacteria phage lambda
experiment	X-ray (resolution=2.10, R-factor=?)
structural superfamily	lambda repressor-like DNA-binding domains;
reference complex	1rio_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 1lli_A interface=1,41,42,52, KkpltqeqledarrlkaiyekkknelglsqesladklgmgQSgigalfngiNalnaynaallakilkvsveefspsiareiyemyeavs > 1lli_B interface=1,2,3,4,44,45,54,55, STKKkpltqeqledarrlkaiyekkknelglsqesladklgmgQSgigalfngINalnaynaallakilkvsveefspsiareiyemyeavs
interface signature	KQSN/STKKQSIN

Estimated binding specificities ?

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# IC=15.396 IC/col=0.906 n_of_columns=17

specificity:

A |   0  96  24   0  66  78   0  24   0   6   0   0  12   0  63   0  87
C |   0   0  24  96  12  18   0  24   0  63   0   0   9   0  12   0   3
G |   0   0  24   0   9   0   0  24  96  18  96  96   9  96   9   0   3
T |  96   0  24   0   9   0  96  24   0   9   0   0  66   0  12  96   3

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updated Fri Dec 13 09:43:28 2024