1lmb_34 : 3D-footprint complex

structure name	REFINED 1.8 ANGSTROM CRYSTAL STRUCTURE OF THE LAMBDA REPRESSOR- OPERATOR COMPLEX
reference	Beamer et al.
source	ENTEROBACTERIA PHAGE LAMBDA
experiment	X-ray (resolution=1.80, R-factor=?)
structural superfamily	lambda repressor-like DNA-binding domains;
reference complex	1lmb_4 1rio_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 1lmb_3 interface=29,39,40,50, pltqeqledarrlkaiyekkknelglsqEsvadkmgmgQSgvgalfngiNalnaynaallakilkvsveefspsiareiyemyeavs > 1lmb_4 interface=3,4,34,44,45,55, stKKkpltqeqledarrlkaiyekkknelglsqEsvadkmgmgQSgvgalfngiNalnaynaallakilkvsveefspsiareiyemyeavs
interface signature	EQSN/KKEQSN

Estimated binding specificities ?

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# IC=14.532 IC/col=0.855 n_of_columns=17

specificity:

A |   6  96  24   1  24  90   5  24   0   0   0   0  11   0  70   0  96
C |   5   0  24  90  24   6  10  24   0  96   0   0  15   0   6   0   0
G |   5   0  24   0  24   0  10  24  80   0  96  96  10  96   5   0   0
T |  80   0  24   5  24   0  71  24  16   0   0   0  60   0  15  96   0

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updated Mon Sep 9 12:49:07 2024