1lmb_34 : 3D-footprint complex

structure name	REFINED 1.8 ANGSTROM CRYSTAL STRUCTURE OF THE LAMBDA REPRESSOR- OPERATOR COMPLEX
reference	Beamer et al.
source	ENTEROBACTERIA PHAGE LAMBDA
experiment	X-ray (resolution=1.80, R-factor=?)
structural superfamily	lambda repressor-like DNA-binding domains;
reference complex	1rio_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 1lmb_3 interface=29,39,40,50, pltqeqledarrlkaiyekkknelglsqEsvadkmgmgQSgvgalfngiNalnaynaallakilkvsveefspsiareiyemyeavs > 1lmb_4 interface=3,4,34,44,45,55, stKKkpltqeqledarrlkaiyekkknelglsqEsvadkmgmgQSgvgalfngiNalnaynaallakilkvsveefspsiareiyemyeavs
interface signature	EQSN/KKEQSN

Estimated binding specificities ?

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# IC=14.919 IC/col=0.878 n_of_columns=17

specificity:

A |   0  96  13   0  73   0   0   0  14  24  74   1  24   5  24   0  84
C |   0   0   9  96   5  96  96   0  82  24   9   0  24   0  24   0   4
G |   0   0  10   0   9   0   0  96   0  24   9   4  24  91  24   0   4
T |  96   0  64   0   9   0   0   0   0  24   4  91  24   0  24  96   4

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updated Fri Dec 13 09:43:44 2024