1lmb_34 : 3D-footprint complex

structure name	REFINED 1.8 ANGSTROM CRYSTAL STRUCTURE OF THE LAMBDA REPRESSOR- OPERATOR COMPLEX
reference	Beamer et al.
source	ENTEROBACTERIA PHAGE LAMBDA
experiment	X-ray (resolution=1.80, R-factor=?)
structural superfamily	lambda repressor-like DNA-binding domains;
reference complex	1lmb_4 1rio_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 1lmb_3 interface=29,39,40,50, pltqeqledarrlkaiyekkknelglsqEsvadkmgmgQSgvgalfngiNalnaynaallakilkvsveefspsiareiyemyeavs > 1lmb_4 interface=3,4,34,44,45,55, stKKkpltqeqledarrlkaiyekkknelglsqEsvadkmgmgQSgvgalfngiNalnaynaallakilkvsveefspsiareiyemyeavs
interface signature	EQSN/KKEQSN

Estimated binding specificities ?

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# IC=14.543 IC/col=0.855 n_of_columns=17

specificity:

A |   0  96  16   0  60   0   0   0  15  24  71   0  24   5  24   0  80
C |   0   0   5  96  10  96  96   0  80  24  10   1  24   0  24   0   5
G |   0   0   5   0  10   0   0  96   0  24  10   5  24  91  24   0   5
T |  96   0  70   0  16   0   0   0   1  24   5  90  24   0  24  96   6

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updated Tue Jul 29 15:19:02 2025