interface graph thumbnail
legend  pdf

structure nameCRYSTAL STRUCTURE OF E. COLI SEQA COMPLEXED WITH HEMIMETHYLATED DNA
(SeqA protein)
referenceGuirlando et al. NAT.STRUCT.BIOL. 9 839 2002
sourceEscherichia coli
experimentX-ray (resolution=2.65, R-factor=?)
structural superfamilyReplication modulator SeqA, C-terminal DNA-binding domain;
sequence familySeqA protein;
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureRRQNNR

Estimated binding specificities ?

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# IC=3.119 IC/col=0.520 n_of_columns=6 specificity:   
A |  10  30  24  96  24   9
C |  86  38  24   0  24  76
G |   0  19  24   0  24   2
T |   0   9  24   0  24   9
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updated Fri Sep 13 15:48:41 2024