1mhd_AB : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF A SMAD MH1 DOMAIN BOUND TO DNA
reference	'Cell(Cambridge,Mass.)' 94 585 1998
source	HOMO SAPIENS
experiment	X-ray (resolution=2.80, R-factor=?)
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 1mhd_A interface=65,67,72, pivkrllgwkkgeqngqeekwcekavkslvkklkktgqldelekaittqnvntkcitiprsldgRlQvshrKglphviycrlwrwpdlhshhelramelcefafnmkkdevcvnpyhyqrvet > 1mhd_B interface=65,67,72, pivkrllgwkkgeqngqeekwcekavkslvkklkktgqldelekaittqnvntkcitiprsldgRlQvshrKglphviycrlwrwpdlhshhelramelcefafnmkkdevcvnpyhyqrvet
interface signature	RQK/RQK

Estimated binding specificities ?

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# IC=9.804 IC/col=0.980 n_of_columns=10

specificity:

A |  67   0  11  96   0  96  11  58   0  96
C |   5   0  18   0   0   0   5  11  96   0
G |  16  96  11   0   0   0  80  16   0   0
T |   8   0  56   0  96   0   0  11   0   0

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updated Fri Dec 13 09:57:29 2024