1mhd_AB : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF A SMAD MH1 DOMAIN BOUND TO DNA
reference	'Cell(Cambridge,Mass.)' 94 585 1998
source	HOMO SAPIENS
experiment	X-ray (resolution=2.80, R-factor=?)
structural superfamily	SMAD MH1 domain;
reference complex	5od6_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 1mhd_A interface=65,67,72, pivkrllgwkkgeqngqeekwcekavkslvkklkktgqldelekaittqnvntkcitiprsldgRlQvshrKglphviycrlwrwpdlhshhelramelcefafnmkkdevcvnpyhyqrvet > 1mhd_B interface=65,67,72, pivkrllgwkkgeqngqeekwcekavkslvkklkktgqldelekaittqnvntkcitiprsldgRlQvshrKglphviycrlwrwpdlhshhelramelcefafnmkkdevcvnpyhyqrvet
interface signature	RQK/RQK

Estimated binding specificities ?

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# IC=9.934 IC/col=0.993 n_of_columns=10

specificity:

A |   0   0  15   0   0  96   0  51   0   6
C |   0   0  12  71   0   0   0  19  96   6
G |   0  96  12  19   0   0   0  12   0   1
T |  96   0  57   6  96   0  96  14   0  83

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updated Tue Jul 29 15:33:05 2025