interface graph thumbnail
legend  pdf

structure nameCRYSTAL STRUCTURE OF A YEAST TFIIA/TBP/DNA COMPLEX
referenceBleichenbacher et al. J.Mol.Biol. 332 783 2003
sourceSACCHAROMYCES CEREVISIAE
experimentX-ray (resolution=1.90, R-factor=?)
structural superfamilyTranscription factor IIA TFIIA, beta-barrel domain;TATA-box binding protein-like;
reference complex1nh2_C 1ytb_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureNVFLFVTNVFPLFVT/LLT

Estimated binding specificities ?

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# IC=7.099 IC/col=0.887 n_of_columns=8 specificity:   
A |  13   0  13   0   0  24   0  96
C |  13   0  16   0   0  24   0   0
G |  54   0  13   0   0  24   0   0
T |  16  96  54  96  96  24  96   0
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updated Mon Sep 9 13:06:40 2024