1osl_AB : 3D-footprint complex

structure name	SOLUTION STRUCTURE OF A DIMERIC LACTOSE DNA-BINDING DOMAIN COMPLEXED TO A NONSPECIFIC DNA SEQUENCE
source	ESCHERICHIA COLI
experiment	NMR
structural superfamily	lambda repressor-like DNA-binding domains;
reference complex	1l1m_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 1osl_A interface=7,17,18,19,21,22,29,51, mkpvtlYdvaeyagvsYQTvSRvvnqasHvsaktrekveaamaelnyipnRcaqqlagkqsl > 1osl_B interface=7,16,17,18,22,59, mkpvtlYdvaeyagvSYQtvsRvvnqashvsaktrekveaamaelnyipnrcaqqlagKqsl
interface signature	YYQTSRHR/YSYQRK

Estimated binding specificities ?

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# IC=13.666 IC/col=0.976 n_of_columns=14

specificity:

A |  84   3  24  96   0  84   6  87   6   3   1   0  96   0
C |   3   3  24   0   3   6   3   3   3  84   3   0   0   0
G |   6   6  24   0  93   3   3   3   3   3   0   3   0   0
T |   3  84  24   0   0   3  84   3  84   6  92  93   0  96

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updated Mon Sep 9 13:13:16 2024