1ozj_AB : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF SMAD3-MH1 BOUND TO DNA AT 2.4 A RESOLUTION
reference	Pavletich et al. J.Biol.Chem. 278 20327 2003
source	Homo sapiens
experiment	X-ray (resolution=2.40, R-factor=?)
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 1ozj_A interface=68,70,73,75, ftppivkrllgwkkgeqngqeekwcekavkslvkklkktgqldelekaittqnvntkcitiprsldgRlQvsHrKglphviycrlwrwpdlhshhelramelcefafnmkkdevcvnpyhyqrvet > 1ozj_B interface=66,68,73, ppivkrllgwkkgeqngqeekwcekavkslvkklkktgqldelekaittqnvntkcitiprsldgRlQvshrKglphviycrlwrwpdlhshhelramelcefafnmkkdevcvnpyhyqrvet
interface signature	RQHK/RQK

Estimated binding specificities ?

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# IC=9.405 IC/col=1.045 n_of_columns=9

specificity:

A |   2   0  10   0   0  96   0  64   0
C |  10   0  10  96   0   0   0  10  96
G |  10  96  10   0   0   0  96  10   0
T |  74   0  66   0  96   0   0  12   0

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updated Fri Dec 13 10:09:31 2024