1ozj_AB : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF SMAD3-MH1 BOUND TO DNA AT 2.4 A RESOLUTION
reference	Pavletich et al. J.Biol.Chem. 278 20327 2003
source	Homo sapiens
experiment	X-ray (resolution=2.40, R-factor=?)
structural superfamily	SMAD MH1 domain;
reference complex	5od6_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 1ozj_A interface=68,70,73,75, ftppivkrllgwkkgeqngqeekwcekavkslvkklkktgqldelekaittqnvntkcitiprsldgRlQvsHrKglphviycrlwrwpdlhshhelramelcefafnmkkdevcvnpyhyqrvet > 1ozj_B interface=66,68,73, ppivkrllgwkkgeqngqeekwcekavkslvkklkktgqldelekaittqnvntkcitiprsldgRlQvshrKglphviycrlwrwpdlhshhelramelcefafnmkkdevcvnpyhyqrvet
interface signature	RQHK/RQK

Estimated binding specificities ?

readout + contact

# IC=9.805 IC/col=1.089 n_of_columns=9

specificity:

A |   0  13   0   0  96   0  54   0  96
C |   0  13  96   0   0   0  13  96   0
G |  96  13   0   0   0  96  13   0   0
T |   0  57   0  96   0   0  16   0   0

scan!

home
updated Tue Jul 29 15:45:03 2025