1p71_AB : 3D-footprint complex

structure name	ANABAENA HU-DNA CORCRYSTAL STRUCTURE (TR3)
reference	Swinger et al. 'Embo 22 3749 2003
source	Anabaena sp.
experiment	X-ray (resolution=1.90, R-factor=?)
structural superfamily	IHF-like DNA-binding proteins;
reference complex	1p71_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 1p71_A interface=58,61,63,64,71, mnkgelvdavaekasvtkkqadavltaaletiieavssgdkvtlvgfgsfesrerkaRegRnPKtnekmeIpatrvpafsagklfrekvappka > 1p71_B interface=58,61,63,64,71, mnkgelvdavaekasvtkkqadavltaaletiieavssgdkvtlvgfgsfesrerkaRegRnPKtnekmeIpatrvpafsagklfrekvappk
interface signature	RRPKI/RRPKI

Estimated binding specificities ?

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# IC=8.431 IC/col=0.649 n_of_columns=13

specificity:

A |   0  96  24   0  54  24  24  24  13   0  24   0   0
C |   0   0  24  96  13  24  24  24  16   0  24   0   0
G |   0   0  24   0  13  24  24  24  13  96  24   0  96
T |  96   0  24   0  16  24  24  24  54   0  24  96   0

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updated Mon Sep 9 13:54:52 2024