1p78_AB : 3D-footprint complex

structure name	ANABAENA HU-DNA COCRYSTAL STRUCTURE (AHU2)
reference	Swinger et al. 'Embo 22 3749 2003
source	Anabaena sp.
experiment	X-ray (resolution=2.25, R-factor=?)
structural superfamily	IHF-like DNA-binding proteins;
reference complex	1p71_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 1p78_A interface=58,61,63,64,71, mnkgelvdavaekasvtkkqadavltaaletiieavssgdkvtlvgfgsfesrerkaRegRnPKtnekmeIpatrvpafsagklfrekvapp > 1p78_B interface=58,61,63,64,71, mnkgelvdavaekasvtkkqadavltaaletiieavssgdkvtlvgfgsfesrerkaRegRnPKtnekmeIpatrvpafsagklfrekvapp
interface signature	RRPKI/RRPKI

Estimated binding specificities ?

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# IC=8.247 IC/col=0.634 n_of_columns=13

specificity:

A |   0  96  24   0  60  24  24  24  12   0  24   0   0
C |   0   0  24  96  12  24  24  24  12  12  24   0   0
G |   0   0  24   0  12  24  24  24  12  84  24   0  96
T |  96   0  24   0  12  24  24  24  60   0  24  96   0

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updated Mon Sep 9 13:54:57 2024