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legend  pdf

structure nameTHE COMPLEX BETWEEN PHAGE 434 REPRESSION DNA-BINDING DOMAIN AND OPERATOR SITE OR3: STRUCTURAL DIFFERENCES BETWEEN CONSENSUS AND NON- CONSENSUS HALF-SITES
referenceHarrison et al.
sourcePHAGE 434
experimentX-ray (resolution=2.50, R-factor=?)
structural superfamilylambda repressor-like DNA-binding domains;
reference complex1per_L
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureQTQQSEQKR/QTQQSE

Estimated binding specificities ?

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# IC=9.072 IC/col=0.567 n_of_columns=16 specificity:   
A |   8  96   0  72  24  24  24  24  24  24  24   0   8   0   0  72
C |   8   0  96   8  24  24  24  24  24  24  24   0   8   0   0   8
G |   8   0   0   8  24  24  24  24  24  24  24   0   0  96   0   8
T |  72   0   0   8  24  24  24  24  24  24  24  96  80   0  96   8
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updated Mon Sep 9 13:55:54 2024