interface graph thumbnail
legend  pdf

structure nameDDATP-TRAPPED CLOSED TERNARY COMPLEX OF THE LARGE FRAGMENT OF DNA POLYMERASE I FROM THERMUS AQUATICUS
(DNA POLYMERASE I)
referenceMitaxov et al. Proc.Natl.Acad.Sci.USA 96 9491 1999
sourceThermus aquaticus
experimentX-ray (resolution=2.30, R-factor=0.235)
structural superfamilyDNA/RNA polymerases;Ribonuclease H-like;
sequence familyDNA polymerase family A; Taq polymerase, exonuclease;
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureKYRNNQH

Estimated binding specificities ?

contactlogo
# IC=2.622 IC/col=0.656 n_of_columns=4 specificity:   
A |   7   0  14   7
C |   0  96  14  61
G |  81   0  46  14
T |   8   0  22  14
scan!

home
updated Mon Dec 16 18:42:15 2024