interface graph thumbnail
legend  pdf

structure nameDDATP-TRAPPED CLOSED TERNARY COMPLEX OF THE LARGE FRAGMENT OF DNA POLYMERASE I FROM THERMUS AQUATICUS
(DNA POLYMERASE I)
referenceMitaxov et al. Proc.Natl.Acad.Sci.USA 96 9491 1999
sourceThermus aquaticus
experimentX-ray (resolution=2.30, R-factor=0.235)
structural superfamilyDNA/RNA polymerases;Ribonuclease H-like;
sequence familyDNA polymerase family A; Taq polymerase, exonuclease;
reference complex6fbc_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureKYRNNQH

Estimated binding specificities ?

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# IC=0.794 IC/col=0.198 n_of_columns=4 specificity:   
A |  14  10  19  19
C |  14  70  19  39
G |  52   8  38  19
T |  16   8  20  19
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updated Sat Aug 2 01:44:54 2025