interface graph thumbnail
legend  pdf

structure nameDDATP-TRAPPED CLOSED TERNARY COMPLEX OF THE LARGE FRAGMENT OF DNA POLYMERASE I FROM THERMUS AQUATICUS
(DNA POLYMERASE I)
referenceMitaxov et al. Proc.Natl.Acad.Sci.USA 96 9491 1999
sourceThermus aquaticus
experimentX-ray (resolution=2.30, R-factor=0.235)
structural superfamilyDNA/RNA polymerases;Ribonuclease H-like;
sequence familyDNA polymerase family A; Taq polymerase, exonuclease;
reference complex6fbc_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureKYRNNQH

Estimated binding specificities ?

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# IC=2.617 IC/col=0.654 n_of_columns=4 specificity:   
A |   6   0  22  13
C |   2  96  13  64
G |  82   0  41   6
T |   6   0  20  13
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updated Sun Jun 28 04:34:11 2026