interface graph thumbnail
legend  pdf

structure nameMUTM (FPG) BOUND TO 5,6-DIHYDROURACIL (DHU) CONTAINING DNA
(MUTM)
referenceVerdine et al. J.Biol.Chem. 278 51543 2003
sourceGEOBACILLUS STEAROTHERMOPHILUS
experimentX-ray (resolution=1.63, R-factor=0.208)
structural superfamilyN-terminal domain of MutM-like DNA repair proteins;S13-like H2TH domain;Glucocorticoid receptor-like DNA-binding domain;
sequence familyFormamidopyrimidineDNA glycosylase N; FormamidopyrimidineDNA glycosylase H2; Zinc finger found in FPG and IleRS;
redundant complexes1r2y 2f5s 1l2d 3jr4 3jr5 2f5n 1l1t 2f5p 2f5o 2f5q 1l1z 1l2c
reference complex3u6p_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence

No structural evidence for specific binding to DNA (<4 informative columns)


Dendrogram of similar interfaces ?

matrix format
  
  RGMGEA--RCFG--------RG   L         +1r2z_A    
                                   +-1 
  RTMT----RCFA--------RT   L     +-2 +1tdz_A    
                                 ! ! 
  --MG----RCFCKGDGACQTRG   L   +-3 +--1k82_A    
                               ! ! 
  QALGYA--------------RG     --4 +----1k3x_A    
                               ! 
  --LG--MTRCFC--------RT       +-----3a46_B    
                             

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updated Thu Sep 12 15:24:10 2024