1rcs_AB : 3D-footprint complex

structure name	NMR STUDY OF TRP REPRESSOR-OPERATOR DNA COMPLEX
source	ESCHERICHIA COLI
experiment	NMR
structural superfamily	TrpR-like;
reference complex	1co0_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 1rcs_A interface=65,66,69,76,77,78,80,81, qspysaamaeqrhqewlrfvdllknayqndlhlpllnlmltpderealgtrvriveellrgemsQRelKnelgagIATiTRgsnslkaapvelrqwleevllks > 1rcs_B interface=65,66,69,76,77,78,80,81, qspysaamaeqrhqewlrfvdllknayqndlhlpllnlmltpderealgtrvriveellrgemsQRelKnelgagIATiTRgsnslkaapvelrqwleevllks
interface signature	QRKIATTR/QRKIATTR

Estimated binding specificities ?

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# IC=13.405 IC/col=0.745 n_of_columns=18

specificity:

A |   0   0  92   0  13  82   9  24  24  24  24  13   0  24   0   0  96   0
C |   0   0   0  96  13   6  10  24  24  24  24  64   0  24   0   9   0  96
G |  96   0   4   0  11   4  68  24  24  24  24   9   0  24  96   1   0   0
T |   0  96   0   0  59   4   9  24  24  24  24  10  96  24   0  86   0   0

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updated Mon Sep 9 14:04:31 2024