1rcs_AB : 3D-footprint complex

structure name	NMR STUDY OF TRP REPRESSOR-OPERATOR DNA COMPLEX
source	ESCHERICHIA COLI
experiment	NMR
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 1rcs_A interface=65,66,69,76,77,78,80,81, qspysaamaeqrhqewlrfvdllknayqndlhlpllnlmltpderealgtrvriveellrgemsQRelKnelgagIATiTRgsnslkaapvelrqwleevllks > 1rcs_B interface=65,66,69,76,77,78,80,81, qspysaamaeqrhqewlrfvdllknayqndlhlpllnlmltpderealgtrvriveellrgemsQRelKnelgagIATiTRgsnslkaapvelrqwleevllks
interface signature	QRKIATTR/QRKIATTR

Estimated binding specificities ?

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# IC=13.315 IC/col=0.740 n_of_columns=18

specificity:

A |   0   0  90   0  15  80  10  24  24  24  24  15   0  24   0   0  96   0
C |   0   0   0  96  10   5  10  24  24  24  24  66   0  24   0  10   0  96
G |  96   0   5   0  11   5  65  24  24  24  24  10   0  24  96   0   0   0
T |   0  96   1   0  60   6  11  24  24  24  24   5  96  24   0  86   0   0

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updated Fri Dec 13 11:04:04 2024