1rpe_LR : 3D-footprint complex

structure name	THE PHAGE 434 OR2/R1-69 COMPLEX AT 2.5 ANGSTROMS RESOLUTION
reference	Shimon et al. J.Mol.Biol. 232 826 1993
source	PHAGE 434
experiment	X-ray (resolution=2.50, R-factor=?)
structural superfamily	lambda repressor-like DNA-binding domains;
reference complex	1per_L
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 1rpe_L interface=17,27,28,29,30,32,33,38,43, sissrvkskriqlglnQaelaqkvgtTQQSiEQlengKtkrpRflpelasalgvsvdwllngt > 1rpe_R interface=27,28,29,30,32,33, sissrvkskriqlglnqaelaqkvgtTQQSiEQlengktkrprflpelasalgvsvdwllngt
interface signature	QTQQSEQKR/TQQSEQ

Estimated binding specificities ?

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# IC=12.268 IC/col=0.767 n_of_columns=16

specificity:

A |  96  96  64  96  96   8  24  24  24  24  56   0   0   8   0  84
C |   0   0  20   0   0   4  24  24  24  24   4   0   0   8   0   4
G |   0   0   8   0   0  64  24  24  24  24  28   0   0  80   0   0
T |   0   0   4   0   0  20  24  24  24  24   8  96  96   0  96   8

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updated Mon Sep 9 14:05:19 2024