1rpe_LR : 3D-footprint complex

structure name	THE PHAGE 434 OR2/R1-69 COMPLEX AT 2.5 ANGSTROMS RESOLUTION
reference	Shimon et al. J.Mol.Biol. 232 826 1993
source	PHAGE 434
experiment	X-ray (resolution=2.50, R-factor=?)
structural superfamily	lambda repressor-like DNA-binding domains;
reference complex	1per_L
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 1rpe_L interface=17,27,28,29,30,32,33,38,43, sissrvkskriqlglnQaelaqkvgtTQQSiEQlengKtkrpRflpelasalgvsvdwllngt > 1rpe_R interface=27,28,29,30,32,33, sissrvkskriqlglnqaelaqkvgtTQQSiEQlengktkrprflpelasalgvsvdwllngt
interface signature	QTQQSEQKR/TQQSEQ

Estimated binding specificities ?

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# IC=11.943 IC/col=0.746 n_of_columns=16

specificity:

A |   5  96   0  96  96   7  24  24  24  24   7   0   0   7   0   6
C |   3   0  86   0   0  15  24  24  24  24  69   0   0   7   0   3
G |   0   0   7   0   0  11  24  24  24  24   5   0   0  23   0   7
T |  88   0   3   0   0  63  24  24  24  24  15  96  96  59  96  80

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updated Tue Jul 29 16:39:44 2025