1run_A : 3D-footprint complex

structure name	CATABOLITE GENE ACTIVATOR PROTEIN (CAP)/DNA COMPLEX + ADENOSINE-3',5'- CYCLIC-MONOPHOSPHATE (PROTEIN CATABOLITE GENE ACTIVATOR PROTEIN CAP)
reference	Vojtechovsky et al. Nat.Struct.Biol. 3 837 1996
source	Escherichia coli
experiment	X-ray (resolution=2.70, R-factor=?)
structural superfamily	cAMP-binding domain-like;"Winged helix" DNA-binding domain;
sequence family	Cyclic nucleotidebinding domain; Bacterial regulatory proteins, crp famil;
multimeric complexes	1lb2_ABE 3iyd_ACDFGH 3n4m_ABC 5ciz_AB 6pb4_CDFGH 6pb5_CFGH 6pb6_CDFGH
reference complex	3n4m_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 1run_A interface=171,172,173,177, ptlewflshchihkypskstlihqgekaetlyyivkgsvavlikdeegkemilsylnqgdfigelglfeegqersawvraktacevaeisykkfrqliqvnpdilmrlsaqmarrlqvtsekvgnlafldvtgriaqtllnlakqpdamthpdgmqikitrqeigqivgcSREtvgRilkmledqnlisahgktivvygtr
interface signature	SRER

readout + contact

# IC=4.066 IC/col=0.813 n_of_columns=5

A |  12   3   4   0  81
C |  12   5   4   0   4
G |  12  85   7  96   7
T |  60   3  81   0   4

home
updated Sat Aug 2 01:49:04 2025