1trr_DEGH : 3D-footprint complex

structure name	TANDEM BINDING IN CRYSTALS OF A TRP REPRESSOR/OPERATOR HALF-SITE COMPLEX
reference	Lawson et al.
source	ESCHERICHIA COLI
experiment	X-ray (resolution=2.40, R-factor=?)
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 1trr_D interface=1,67,68,78,79,80,82,83, AqqspysaamaeqrheewlrfvdllknayqndlhlpllnlmltpderealgtrvriveellrgemsQRelknelgagIATiTRgsnslkaapvelrqwleevll > 1trr_E interface=67,68,71,78,79,80,82, aqqspysaamaeqrheewlrfvdllknayqndlhlpllnlmltpderealgtrvriveellrgemsQRelKnelgagIATiTrgsnslkaapvelrqwleevll > 1trr_G interface=1,67,68,78,79,80,82,83, AqqspysaamaeqrheewlrfvdllknayqndlhlpllnlmltpderealgtrvriveellrgemsQRelknelgagIATiTRgsnslkaapvelrqwleevll > 1trr_H interface=68,71,78,79,80, aqqspysaamaeqrheewlrfvdllknayqndlhlpllnlmltpderealgtrvriveellrgemsqRelKnelgagIATitrgsnslkaapvelrqwleevll
interface signature	AQRIATTR/QRKIATT/AQRIATTR/RKIAT

Estimated binding specificities ?

readout + contact

# IC=25.693 IC/col=0.918 n_of_columns=28

specificity:

A |   0   0   0  76   4  24  24  24   0  96   0   2   0   2  67   0   2   0   0  96  24   7  24   2   9  96   0   0
C |  96   0   0   4  88  24  24  24   0   0  96   2  93   2   9   0  88   0   0   0  24   7  24   2   7   0  96   0
G |   0  96   0   9   2  24  24  24   0   0   0  88   0   4  11  96   2  96   0   0  24   7  24  88   8   0   0  96
T |   0   0  96   7   2  24  24  24  96   0   0   4   3  88   9   0   4   0  96   0  24  75  24   4  72   0   0   0

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updated Fri Dec 13 11:17:52 2024