| structure name | T7 DNA POLYMERASE IN COMPLEX WITH AN N-2-ACETYLAMINOFLUORENE-ADDUCTED DNA (DNA POLYMERASE) |
| reference | Richardson et al. Proc.Natl.Acad.Sci.USA 101 16186 2004 |
| source | ENTEROBACTERIA PHAGE T7 |
| experiment | X-ray (resolution=2.10, R-factor=0.213) |
| structural superfamily | DNA/RNA polymerases;Ribonuclease H-like; |
| sequence family | DNA polymerase family A; |
| redundant complexes | 1skw 1skr 1x9s 1t7p 1sl0 1x9w 1zyq 1tkd 1sl2 1sl1 1tk0 1tk5 1t8e 1tk8 1sks 2ajq 6p7e 6n7w 6n9u 6n9v 6n9w 6n9x |
| links to other resources | NAKB  PDIdb DNAproDB |
| protein sequence |
No structural evidence for specific binding to DNA (<4 informative columns)
Dendrogram of similar interfaces ?
matrix format------------------KT----------RTNGQG------------YA--------------------------------QA---- +------------1x9m_A ! ----------------RC------------RANG--NGRT----YG--YT--SCYC------------------------NTQT---- L ! +-6vdd_A ! +-1 --------------------YG--------RGNG--NGRC----YG--YAIGSCYC----NG----RC--------------QA--HG ! +-2 +-4yfu_D ! ! ! LCMGRCEG----------------SGHGVC---------------------------------------------------------- +--------------9 +-5 +-1kln_A ! ! ! ! ------------------------------RC--NT------QC------------------------------------------HC L ! ! ! ! +-4x0p_B ! ! +-6 +-3 ----------------------------------NT--------------------------------------------------HT L ! ! ! ! +-6xbu_A ! ! ! ! ------------------------------RG--------EG--YGAC--AC----RC----------------------------HC L ! +-----7 +-----4xvk_A +-11 ! --------IAAAVAAAKC------------RTNG--NC----TC----YCMCSAHARAQAEA--------------------QG---- ! ! ! +-6fbc_A ! ! +----4 --------------------------------NA--NC------FC--YG------RG----------------------NGQC---- L ! ! +-1tau_A ! ! ----------------------EG------------------QG--TGYGVG----------EG--------------RG-------- L +-12 ! +------------4boc_A ! ! ! +-8 ------------------------------------------------------------------------------RG-------- L ! ! +-----------10 +------------6ymv_A ! ! ! ----------------------------------------------TT--------QG--------------------------HT-- L -13 ! +--------------1msw_D ! ! ------------------NG----------RT----------IGYG----------------------------EGMCTCNGQT---- ! +----------------------------4ztu_A ! ----------------------------------------------------------------SGRGPTSGRG-------------- L +----------------------------7bhy_A |
home
updated Mon Dec 16 19:04:04 2024