interface graph thumbnail
legend  pdf

structure namePHI29 DNA POLYMERASE, ORTHORHOMBIC CRYSTAL FORM, SSDNA COMPLEX
(DNA polymerase)
referenceKamtekar et al.
sourceBacillus phage phi29
experimentX-ray (resolution=2.70, R-factor=0.219)
structural superfamilyDNA/RNA polymerases;Ribonuclease H-like;
sequence familyDNA polymerase type B, organellar and vir;
reference complex2pyl_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureTNFYVKMDKKL

Estimated binding specificities ?

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# IC=4.639 IC/col=0.928 n_of_columns=5 specificity:   
A |   0  19   7   0   0
C |   0  19   7   0   0
G |   0  19   8   0   0
T |  96  39  74  96  96
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updated Mon Dec 18 06:17:07 2023