interface graph thumbnail
legend  pdf

structure nameTHE GCN4 BASIC REGION LEUCINE ZIPPER BINDS DNA AS A DIMER OF UNINTERRUPTED ALPHA HELICES: CRYSTAL STRUCTURE OF THE PROTEIN-DNA COMPLEX
referenceEllenberger et al.
sourceSACCHAROMYCES CEREVISIAE
experimentX-ray (resolution=2.90, R-factor=?)
structural superfamilyLeucine zipper domain;
reference complex2dgc_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureKNTAAR/KNTAASR

Estimated binding specificities ?

readout + contactlogo
# IC=9.667 IC/col=1.074 n_of_columns=9 specificity:   
A |   0   0  96   0   0   0  96  48  48
C |   0   0   0  96   0  96   0  12  12
G |   0  96   0   0   0   0   0  12  12
T |  96   0   0   0  96   0   0  24  24
scan!

home
updated Fri Dec 13 11:39:29 2024