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structure nameNARL COMPLEXED TO NIRB PROMOTER NON-PALINDROMIC TAIL-TO-TAIL DNA SITE
(Nitratenitrite response regulator protein narL)
referenceKaczor-Grzeskowiak et al.
sourceEscherichia coli
experimentX-ray (resolution=2.30, R-factor=?)
structural superfamilyC-terminal effector domain of the bipartite response regulators;
sequence familyBacterial regulatory proteins, luxR fami; Sigma70, region 4;
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureSTKVHK

Estimated binding specificities ?

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# IC=3.799 IC/col=0.633 n_of_columns=6 specificity:   
A |   8  24   0   8   8  96
C |  11  24   9   8   8   0
G |   8  24  87  69  11   0
T |  69  24   0  11  69   0
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updated Thu Sep 12 15:51:39 2024