1zg1_AB : 3D-footprint complex

structure name	NARL COMPLEXED TO NIRB PROMOTER NON-PALINDROMIC TAIL-TO-TAIL DNA SITE
reference	Kaczor-Grzeskowiak et al.
source	Escherichia coli
experiment	X-ray (resolution=2.30, R-factor=?)
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 1zg1_A interface=35,36,38,39,40,42, rdvnqltprerdilkliaqglpnkmiarrlditeSTvKVHvKhmlkkmklksrveaavwvhqerif > 1zg1_B interface=35,36,38,39,40,42, rdvnqltprerdilkliaqglpnkmiarrlditeSTvKVHvKhmlkkmklksrveaavwvhqerif
interface signature	STKVHK/STKVHK

Estimated binding specificities ?

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# IC=11.197 IC/col=0.700 n_of_columns=16

specificity:

A |   0  96   0   0  24  24  11  24  24  69   5  24   0   0   5  96
C |   0   0  96   0  24  24  11  24  24  11   5  24   0   7   7   0
G |   0   0   0   0  24  24  12  24  24   5   5  24  96  84   5   0
T |  96   0   0  96  24  24  62  24  24  11  81  24   0   5  79   0

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updated Mon Sep 9 14:39:27 2024