1zg1_EF : 3D-footprint complex

structure name	NARL COMPLEXED TO NIRB PROMOTER NON-PALINDROMIC TAIL-TO-TAIL DNA SITE
reference	Kaczor-Grzeskowiak et al.
source	Escherichia coli
experiment	X-ray (resolution=2.30, R-factor=?)
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 1zg1_E interface=35,36,38,39,40,42, rdvnqltprerdilkliaqglpnkmiarrlditeSTvKVHvKhmlkkmklksrveaavwvhqerif > 1zg1_F interface=35,36,38,39,40,42, rdvnqltprerdilkliaqglpnkmiarrlditeSTvKVHvKhmlkkmklksrveaavwvhqerif
interface signature	STKVHK/STKVHK

Estimated binding specificities ?

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# IC=11.048 IC/col=0.691 n_of_columns=16

specificity:

A |   0  84   3   0  24  24   7  24  24  84   6  24   0   0   3  96
C |   0   3  84   3  24  24  14  24  24   3   3  24   0   0  14   0
G |   0   3   6   0  24  24  11  24  24   6   3  24  96  96   3   0
T |  96   6   3  93  24  24  64  24  24   3  84  24   0   0  76   0

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updated Fri Dec 13 11:41:03 2024