1zg1_EF : 3D-footprint complex

structure name	NARL COMPLEXED TO NIRB PROMOTER NON-PALINDROMIC TAIL-TO-TAIL DNA SITE
reference	Kaczor-Grzeskowiak et al.
source	Escherichia coli
experiment	X-ray (resolution=2.30, R-factor=?)
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 1zg1_E interface=35,36,38,39,40,42, rdvnqltprerdilkliaqglpnkmiarrlditeSTvKVHvKhmlkkmklksrveaavwvhqerif > 1zg1_F interface=35,36,38,39,40,42, rdvnqltprerdilkliaqglpnkmiarrlditeSTvKVHvKhmlkkmklksrveaavwvhqerif
interface signature	STKVHK/STKVHK

Estimated binding specificities ?

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# IC=13.525 IC/col=0.845 n_of_columns=16

specificity:

A |   0  96   0   0  17  94   0  24  24  50  24  18  96   0   0  96
C |   0   0  96  96  45   2   0  24  24  18  24  16   0   0   3   0
G |   0   0   0   0  16   0   0  24  24  14  24  48   0  96   0   0
T |  96   0   0   0  18   0  96  24  24  14  24  14   0   0  93   0

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updated Tue Jul 29 17:15:40 2025