1zg1_EF : 3D-footprint complex

structure name	NARL COMPLEXED TO NIRB PROMOTER NON-PALINDROMIC TAIL-TO-TAIL DNA SITE
reference	Kaczor-Grzeskowiak et al.
source	Escherichia coli
experiment	X-ray (resolution=2.30, R-factor=?)
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 1zg1_E interface=35,36,38,39,40,42, rdvnqltprerdilkliaqglpnkmiarrlditeSTvKVHvKhmlkkmklksrveaavwvhqerif > 1zg1_F interface=35,36,38,39,40,42, rdvnqltprerdilkliaqglpnkmiarrlditeSTvKVHvKhmlkkmklksrveaavwvhqerif
interface signature	STKVHK/STKVHK

Estimated binding specificities ?

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# IC=13.008 IC/col=0.813 n_of_columns=16

specificity:

A |   0  83   0   0   9  93   3  24  24  54  24   9  96   0   3  96
C |   0   0  96  96  54   3   0  24  24  11  24   7   0   0   0   0
G |   0  12   0   0  16   0  12  24  24  14  24  63   0  96   0   0
T |  96   1   0   0  17   0  81  24  24  17  24  17   0   0  93   0

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updated Mon Sep 9 14:39:39 2024