1zg5_AB : 3D-footprint complex

structure name	NARL COMPLEXED TO NARG-89 PROMOTER PALINDROMIC TAIL-TO-TAIL DNA SITE
reference	Kaczor-Grzeskowiak et al.
source	Escherichia coli
experiment	X-ray (resolution=2.30, R-factor=?)
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 1zg5_A interface=35,36,38,39,40,42, rdvnqltprerdilkliaqglpnkmiarrlditeSTvKVHvKhmlkkmklksrveaavwvhqerif > 1zg5_B interface=35,36,38,39,40,42, rdvnqltprerdilkliaqglpnkmiarrlditeSTvKVHvKhmlkkmklksrveaavwvhqerif
interface signature	STKVHK/STKVHK

Estimated binding specificities ?

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# IC=12.321 IC/col=0.770 n_of_columns=16

specificity:

A |   0  82  44   0   7   0  21  24  24  55   0  24   0   0   6  96
C |   0   3  50  96  76  96  11  24  24  21   0  24   0   0  26   0
G |   0  11   1   0   4   0   7  24  24  11  96  24  96  96   7   0
T |  96   0   1   0   9   0  57  24  24   9   0  24   0   0  57   0

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updated Tue Jul 29 17:15:51 2025