1zg5_EF : 3D-footprint complex

structure name	NARL COMPLEXED TO NARG-89 PROMOTER PALINDROMIC TAIL-TO-TAIL DNA SITE
reference	Kaczor-Grzeskowiak et al.
source	Escherichia coli
experiment	X-ray (resolution=2.30, R-factor=?)
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 1zg5_E interface=36,37,39,40,41,43, erdvnqltprerdilkliaqglpnkmiarrlditeSTvKVHvKhmlkkmklksrveaavwvhqerif > 1zg5_F interface=35,36,38,39,40,42, rdvnqltprerdilkliaqglpnkmiarrlditeSTvKVHvKhmlkkmklksrveaavwvhqerif
interface signature	STKVHK/STKVHK

Estimated binding specificities ?

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# IC=12.687 IC/col=0.793 n_of_columns=16

specificity:

A |   0  24   0   0  11   0  14  24  24  59   0  12   0   0   3  96
C |   0  24  96  96  70  96  11  24  24  14   0  11   0   0  14   0
G |   0  24   0   0   3   0  12  24  24  11  96  66  96  96  11   0
T |  96  24   0   0  12   0  59  24  24  12   0   7   0   0  68   0

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updated Fri Dec 13 11:41:20 2024