1zg5_EF : 3D-footprint complex

structure name	NARL COMPLEXED TO NARG-89 PROMOTER PALINDROMIC TAIL-TO-TAIL DNA SITE
reference	Kaczor-Grzeskowiak et al.
source	Escherichia coli
experiment	X-ray (resolution=2.30, R-factor=?)
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 1zg5_E interface=36,37,39,40,41,43, erdvnqltprerdilkliaqglpnkmiarrlditeSTvKVHvKhmlkkmklksrveaavwvhqerif > 1zg5_F interface=35,36,38,39,40,42, rdvnqltprerdilkliaqglpnkmiarrlditeSTvKVHvKhmlkkmklksrveaavwvhqerif
interface signature	STKVHK/STKVHK

Estimated binding specificities ?

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# IC=13.600 IC/col=0.850 n_of_columns=16

specificity:

A |   0  64   0   0  11   0   8  24  24  64   0   8   0   0   8  96
C |   0  11  96  96  75  96   8  24  24   8   0   6   0   0  17   0
G |   0  17   0   0   2   0   8  24  24  11  96  76  96  96  11   0
T |  96   4   0   0   8   0  72  24  24  13   0   6   0   0  60   0

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updated Mon Sep 9 14:40:01 2024