1zgw_A : 3D-footprint complex

structure name	NMR STRUCTURE OF E. COLI ADA PROTEIN IN COMPLEX WITH DNA (ADA POLYPROTEIN)
source	ESCHERICHIA COLI
experiment	NMR
structural superfamily	Ada DNA repair protein, N-terminal domain N-Ada 10;Homeodomain-like;
sequence family	Metal binding domain of Ada; Bacterial regulatory helixturnhelix;
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 1zgw_A interface=34,43,44,70,113,114,116,117,128, mkkatcltddqrwqsvlardpnadgefvfavrtTgifrpscrARhalrenvsfyanasealaagfrpckRcqpdkanprqhrldkithacrlleqetpvtlealadqvamspFHlHRlfkattgmtpKawqqawrarr
interface signature	TARRFHHRK

Estimated binding specificities ?

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# IC=10.627 IC/col=0.886 n_of_columns=12

specificity:

A |  96   0   0  72  64  24  24   0   0   0  96  56
C |   0   0   0   8  16  24  24  96   0  96   0  16
G |   0   0   0   8   0  24  24   0  96   0   0  16
T |   0  96  96   8  16  24  24   0   0   0   0   8

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updated Tue Dec 17 22:33:05 2024