1zme_CD : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF PUT3/DNA COMPLEX
reference	Swaminathan et al. Nat.Struct.Biol. 4 751 1997
source	SACCHAROMYCES CEREVISIAE
experiment	X-ray (resolution=2.50, R-factor=?)
structural superfamily	Zn2/Cys6 DNA-binding domain;
reference complex	1zme_D
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 1zme_C interface=11, svaclscrkrHikcpggnpcqkcvtsnaiceylepskkivvstkylqqlqkdlndkteennrlkalller > 1zme_D interface=11,37,39,40, svaclscrkrHikcpggnpcqkcvtsnaiceylepsKkIVvstkylqqlqkdlndkteennrlkalller
interface signature	H/HKIV

Estimated binding specificities ?

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# IC=9.764 IC/col=0.610 n_of_columns=16

specificity:

A |   0   0   0  24  24  24  16  16   0  24  24  24  24   0   0   0
C |  96   0   0  24  24  24  13  13   0  24  24  24  24  96  96   0
G |   0  96  96  24  24  24  13  54  96  24  24  24  24   0   0  96
T |   0   0   0  24  24  24  54  13   0  24  24  24  24   0   0   0

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updated Fri Dec 13 11:45:38 2024