interface graph thumbnail
legend  pdf

structure nameCRYSTAL STRUCTURE OF A CCPA-CRH-DNA COMPLEX
(GLUCOSE-RESISTANCE AMYLASE REGULATOR)
referenceSchumacher et al. J.Biol.Chem. 281 6793 2006
sourceBACILLUS SUBTILIS
experimentX-ray (resolution=2.98, R-factor=0.235)
structural superfamilyPeriplasmic binding protein-like I;lambda repressor-like DNA-binding domains;
sequence familyPeriplasmic binding proteins and sugar b; Bacterial regulatory proteins, lacI fami;
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureSARLA

Estimated binding specificities ?

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# IC=3.658 IC/col=0.457 n_of_columns=8 specificity:   
A |   0   9  45  24  24  21   0   9
C |   0   9  16  24  24  23  96   9
G |   0  67  19  24  24  31   0  67
T |  96  11  16  24  24  21   0  11
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updated Tue Dec 17 22:35:29 2024