interface graph thumbnail
legend  pdf

structure nameRESTRICTION ENDONUCLEASE BAMHI COMPLEX WITH DNA AND CALCIUM IONS (PRE- REACTIVE COMPLEX).
(PROTEIN ENDONUCLEASE BAMHI)
referenceAggarwal et al.
sourceBacillus amyloliquefaciens
experimentX-ray (resolution=2.00, R-factor=0.233)
structural superfamilyRestriction endonuclease-like;
sequence familyRestriction endonuclease BamHI;
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureNRTDRVDM

Estimated binding specificities ?

readout + contactlogo
# IC=6.679 IC/col=0.954 n_of_columns=7 specificity:   
A |   9   0  57   0   0   0  96
C |  19  19  19   0  96  96   0
G |  48  76   1   0   0   0   0
T |  20   1  19  96   0   0   0
scan!

home
updated Mon Dec 16 19:22:24 2024