2bjc_AB : 3D-footprint complex

structure name	NMR STRUCTURE OF A PROTEIN-DNA COMPLEX OF AN ALTERED SPECIFICITY MUTANT OF THE LAC REPRESSOR HEADPIECE THAT MIMICS THE GAL REPRESSOR
source	ESCHERICHIA COLI
experiment	NMR
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 2bjc_A interface=6,7,16,17,18,21,29,53,56,57,60, mkpvtLYdvaeyagvSVAtvSrvvnqasHvsaktrekveaamaelnyipnrcAqqLAgkQsl > 2bjc_B interface=6,7,16,17,18,21,29,53,56,57,60, mkpvtLYdvaeyagvSVAtvSrvvnqasHvsaktrekveaamaelnyipnrcAqqLAgkQsl
interface signature	LYSVASHALAQ/LYSVASHALAQ

Estimated binding specificities ?

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# IC=12.499 IC/col=1.042 n_of_columns=12

specificity:

A |   5   5  81  96   0   0   0   0   0   5  81   6
C |   5   5   5   0   0  96   0  96   0   5   5  80
G |  81   6   5   0  96   0  96   0   0   6   5   5
T |   5  80   5   0   0   0   0   0  96  80   5   5

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updated Fri Dec 13 11:48:29 2024