interface graph thumbnail
legend  pdf

structure nameCATABOLITE GENE ACTIVATOR PROTEIN/DNA COMPLEX, ADENOSINE-3',5'-CYCLIC- MONOPHOSPHATE
(PROTEIN CATABOLITE GENE ACTIVATOR PROTEIN)
referencePassner et al.
sourceESCHERICHIA COLI
experimentX-ray (resolution=2.20, R-factor=0.237)
structural superfamilycAMP-binding domain-like;"Winged helix" DNA-binding domain;
sequence familyCyclic nucleotidebinding domain; Bacterial regulatory proteins, crp famil;
multimeric complexes1lb2_ABE 3iyd_ACDFGH 3n4m_ABC 5ciz_AB 6pb4_CDFGH 6pb5_CFGH 6pb6_CDFGH
reference complex3n4m_B
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureSRETR

Estimated binding specificities ?

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# IC=5.444 IC/col=0.907 n_of_columns=6 specificity:   
A |  10   0   2   0  96  10
C |  10   0  10   0   0  66
G |  10  96  10  96   0  10
T |  66   0  74   0   0  10
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updated Thu Sep 12 15:59:36 2024