2efw_FG : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF THE RTP:NRB COMPLEX FROM BACILLUS SUBTILIS
reference	Wilce et al. J.Mol.Biol. 370 481 2007
source	Bacillus subtilis
experiment	X-ray (resolution=2.50, R-factor=?)
structural superfamily	"Winged helix" DNA-binding domain;
reference complex	1f4k_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 2efw_F interface=9,28,46,47,48,51,52,76, stgflvkqRaflklymitmteqerlygLkllevlrsefkeigfkpNHTevYRslhellddgilkqikvkkegaklQevvlyqfkdyeaaklykkqlkveldrskkliekalsdnf > 2efw_G interface=46,47,48,52, stgflvkqraflklymitmteqerlyglkllevlrsefkeigfkpNHTevyRslhellddgilkqikvkevvlyqfkdyeaaklykkqlkveldrskkliekalsdnf
interface signature	RLNHTYRQ/NHTR

Estimated binding specificities ?

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# IC=8.472 IC/col=0.652 n_of_columns=13

specificity:

A |   0  24  24   0  16  96  96   0  57  24  24  24   0
C |   0  24  24   0  13   0   0  96  13  24  24  24   0
G |  96  24  24   0  54   0   0   0  13  24  24  24  96
T |   0  24  24  96  13   0   0   0  13  24  24  24   0

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updated Mon Sep 9 14:57:31 2024