interface graph thumbnail
legend  pdf

structure nameESCHERICHIA COLI REPLICATION TERMINATOR PROTEIN (TUS) COMPLEXED WITH DNA- LOCKED FORM
(DNA replication terminus site-binding protein)
referenceSchaeffer et al. 'Cell(Cambridge,Mass.)' 125 1309 2006
sourceEscherichia coli
experimentX-ray (resolution=2.70, R-factor=0.223)
structural superfamilyReplication terminator protein Tus;
sequence familyDNA replication terminus sitebinding protei;
reference complex2i06_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureKRLAKIIRVQIRQQARYP

Estimated binding specificities ?

readout + contactlogo
# IC=11.449 IC/col=1.041 n_of_columns=11 specificity:   
A |  76   0   0   6   0   0   0  96  96  12   0
C |   8   0   0   6   6   6   0   0   0  66   0
G |   0   0  96  12   6  83   0   0   0  12   0
T |  12  96   0  72  84   7  96   0   0   6  96
scan!

home
updated Mon Dec 16 19:31:28 2024