2hoi_GH : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF THE TETRAMERIC PRE-CLEAVAGE SYNAPTIC COMPLEX IN THE CRE-LOXP SITE-SPECIFIC RECOMBINATION
reference	Van Duyne et al. J.Biol.Chem. 282 24004 2007
source	Enterobacteria phage P1
experiment	X-ray (resolution=2.60, R-factor=?)
structural superfamily	DNA breaking-rejoining enzymes;lambda integrase-like, N-terminal domain;
reference complex	7rhx_G
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 2hoi_G interface=21,22,24,25,28,67,68,71,75,222,225,238,240,243,263,298,301, sdevrknlmdmfrdrqafseHTwKMllSvcrswaawcklnnrkwfpaepedvrdyllylqarglavKTiqQhlgQlnmlhrrsglprpsdsnavslvmrrirkenvdagerakqalafertdfdqvrslmensdrcqdirnlaflgiayntllriaeiarirvkdisrtdggrmlihigrtatlvstagvekalslgvtklverwisvsgvaddpnnylfcRvrKngvaapsatsqlStRalEgifeathrliygakddsgqRylawsghsarvgaardmaragvsipeimqaggwtNvnIvmnyirnldsetgamvrlled > 2hoi_H interface=21,22,25,28,67,68,71,75,222,224,225,238,240,241,243,263,298,300, sdevrknlmdmfrdrqafseHTwkMllSvcrswaawcklnnrkwfpaepedvrdyllylqarglavKTiqQhlgQlnmlhrrsglprpsdsnavslvmrrirkenvdagerakqalafertdfdqvrslmensdrcqdirnlaflgiayntllriaeiarirvkdisrtdggrmlihigrtatlvstagvekalslgvtklverwisvsgvaddpnnylfcRvRKngvaapsatsqlStRAlEgifeathrliygakddsgqRylawsghsarvgaardmaragvsipeimqaggwtNvNivmnyirnldsetgamvrlled
interface signature	HTKMSKTQQRKSRERNI/HTMSKTQQRRKSRAERNN

Estimated binding specificities ?

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# IC=29.909 IC/col=0.906 n_of_columns=33

specificity:

A |   0  57  24  24  24   1   0   0   0  96   0  96  10   0  24  24  96   6  85   0   0  96   0  96   0   0  88  71  24  24   1  96   0
C |   1   5  24  24  24   4  96   0   0   0   0   0   0   0  24  24   0  36   1  96   0   0   0   0  96   0   6   9  24  24   4   0   6
G |   1  13  24  24  24   3   0  96   0   0   0   0  86   0  24  24   0   3   9   0   0   0   0   0   0  96   1   7  24  24   1   0   0
T |  94  21  24  24  24  88   0   0  96   0  96   0   0  96  24  24   0  51   1   0  96   0  96   0   0   0   1   9  24  24  90   0  90

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updated Mon Jan 5 00:45:14 2026