2ih5_A : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF THE ADENINE-SPECIFIC DNA METHYLTRANSFERASE M.TAQI COMPLEXED WITH THE COFACTOR ANALOG AETA AND A 10 BP DNA CONTAINING AN ABASIC SITE ANALOG AT THE TARGET BASE PARTNER POSITION (Modification methylase TaqI)
reference	Scheidig et al.
source	Thermus aquaticus
experiment	X-ray (resolution=1.80, R-factor=0.163)
structural superfamily	DNA methylase specificity domain;S-adenosyl-L-methionine-dependent methyltransferases;
reference complex	2ih2_D
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 2ih5_A interface=1,85,88,96,97,119,176,179,180,181,248,251,252,253,254,303,315,316,333,334,373,374, VetppevvdfmvslaeaprggrvlepacahgpflrafreahgtayrfvgveidpkaldlppwaegiladfllwepgeafdlilgNppYgivgeasKYpihvfkavkdlykkafstwkgKynlygaflekavrllkpggvlvfvvpatwlvledfallreflaregktsvyylgevFpqKKVsavvirfqksgkglslwdtqesesgftpilwaeyphwegeiirfeteetrkleisgmplgdlfhirFaaRSPEfkkhpavrkepgpglvpvltgrnlkpgwvdyeknhsglwmpkerakelRdfyatphlvvaHTkgtrvvaawderaypwREefhllpkegvrldpsslvqwlnseamqkhvrtlyrdfvPHltlrmlerlpvrreyg
interface signature	VNYKYKFKKVFRSPERHTREPH

contact

# IC=5.339 IC/col=0.667 n_of_columns=8

A |  67   0  67  24   0   0  24  69
C |   9  96   9  24  96   0  24   9
G |   9   0   9  24   0  96  24   9
T |  11   0  11  24   0   0  24   9

home
updated Mon Dec 16 19:42:12 2024