interface graph thumbnail
legend  pdf

structure nameCRYSTAL STRUCTURE OF THE ADENINE-SPECIFIC DNA METHYLTRANSFERASE M.TAQI COMPLEXED WITH THE COFACTOR ANALOG AETA AND A 10 BP DNA CONTAINING AN ABASIC SITE ANALOG AT THE TARGET BASE PARTNER POSITION
(Modification methylase TaqI)
referenceScheidig et al.
sourceThermus aquaticus
experimentX-ray (resolution=1.80, R-factor=0.163)
structural superfamilyDNA methylase specificity domain;S-adenosyl-L-methionine-dependent methyltransferases;
reference complex2ih2_D
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureVNYKYKFKKVFRSPERHTREPH

Estimated binding specificities ?

contactlogo
# IC=5.300 IC/col=0.663 n_of_columns=8 specificity:   
A |  67   0  67  24   0   0  24  67
C |   9  96   9  24  96   0  24   9
G |  11   0   9  24   0  96  24   9
T |   9   0  11  24   0   0  24  11
scan!

home
updated Thu Jan 8 20:12:05 2026