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interface graphinterface matrix

3D-footprint cannot reliably estimate the specificity of 'beta and beta-prime subunits of DNA dependent RNA-polymerases', as these often contain single-stranded DNA molecules which accumulate many base contacts which distort the calculations.

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updated Mon Dec 18 06:55:35 2023

structure name	CPD LESION CONTAINING RNA POLYMERASE II ELONGATION COMPLEX D (DNA-DIRECTED RNA POLYMERASE II 140 KDA POLYPEPTIDE)
reference	Brueckner et al. Science 315 859 2007
source	SACCHAROMYCES CEREVISIAE
experiment	X-ray (resolution=3.80, R-factor=0.269)
structural superfamily	beta and beta-prime subunits of DNA dependent RNA-polymerase;
sequence family	RNA polymerase Rpb2, domain 6; RNA polymerase beta subunit; RNA polymerase Rpb2, domain 2; RNA polymerase Rpb2, domain 7; RNA polymerase Rpb2, domain 4; RNA polymerase Rpb2, domain 5; RNA polymerase Rpb2, domain 3;
links to other resources	NAKB PDIdb DNAproDB